DATA WAREHOUSE PROSIGHTPD 4
Unlike other search engines, ProSightPD utilizes prior knowledge of the location of post translational and sequence modifications. This prior knowledge is stored in our proprietary PTM Warehouse™ file format. Users of all versions of ProSightPD 4 can use these files to install our compilation of the known modification information of specific organisms.
If you have any questions or requests, please contact the developers.
If you would like a database to be created for a particular organism, please send the taxonomy id here. Taxon identifiers can be found here. For instance, if you search for “Homo sapiens” on that UniProt site, the Taxon identifier is 9606.
| Name | Files Available for Download | |
|---|---|---|
| Pierce Intact Protein Standard Mix | TD Complex PSDB (44 KB) | UniProt XML File (6 KB) |
| Top Down Standard Mix | TD Complex PSDB (33 KB) | UniProt TXT File (88 KB) |
| Organism/Species | Strain | Files Available for Download | |
|---|---|---|---|
| Human Histones: July 2016 | TD PSDB (128 KB) | UniProt XML File (2 MB) |
| Organism/Species | Strain | Files Available for Download | |
|---|---|---|---|
| Methanocaldo jannaschii | ATCC 43067 | PSDB (916 KB) | UniProt XML File (13 MB) |
| Methanosarcina acetivorans | ATCC 35395 C2A | PSDB (2 MB) | UniProt XML File (27 MB) |
| Nitrosopumilus maritimus | SCM1 | PSDB (860 KB) | UniProt XML File (11 MB) |
| Sulfolobus solfataricus | ATCC 35092 P2 | PSDB (1 MB) | UniProt XML File (18 MB) |
| Organism/Species | Strain | Files Available for Download | |
|---|---|---|---|
| Agrobacterium tumefaciens | C58 ATCC 33970 | PSDB (2 MB) | UniProt XML File (43 MB) |
| Bacillus anthracis | ATCC 14578 | PSDB (2 MB) | UniProt XML File (30 MB) |
| Bacillus cereus | ATCC 10987 | PSDB (2 MB) | UniProt XML File (29 MB) |
| Bacillus subtilis | 168 | PSDB (2 MB) | UniProt XML File (52 MB) |
| Bordetella pertussis | ATCC 9797 | PSDB (1 MB) | UniProt XML File (18 MB) |
| Borrelia burgdorferi | ATCC 35210 | PSDB (640 KB) | UniProt XML File (8 MB) |
| Caulobacter crescentus | ATCC 19089 | PSDB (1 MB) | UniProt XML File (24 MB) |
| Clostridium acetobutylicum | ATCC 824 | PSDB (1 MB) | UniProt XML File (23 MB) |
| Deinococcus radiodurans | ATCC 13939 | PSDB (1 MB) | UniProt XML File (20 MB) |
| Enterococcus faecalis | ATCC 700802 | PSDB (1 MB) | UniProt XML File (20 MB) |
| Escherichia coli | ATCC 33849 K12 | PSDB (2 MB) | UniProt XML File (68 MB) |
| Francisella tularensis | SCHU S4 | PSDB (812 KB) | UniProt XML File (9 MB) |
| Haemophilus influenzae | ATCC 51907 | PSDB (1000 KB) | UniProt XML File (14 MB) |
| Helicobacter pylori | ATCC 700392 | PSDB (880 KB) | UniProt XML File (11 MB) |
| Klebsiella pneumoniae | ATCC 700721 | PSDB (2 MB) | UniProt XML File (34 MB) |
| Lactococcus lactis | IL1403 | PSDB (1 MB) | UniProt XML File (13 MB) |
| Listeria monocytogenes | ATCC BAA-679 | PSDB (1 MB) | UniProt XML File (21 MB) |
| Mycobacterium smegmatis | ATCC 700084 | PSDB (3 MB) | UniProt XML File (36 MB) |
| Mycobacterium tuberculosis | ATCC 9360 | PSDB (2 MB) | UniProt XML File (38 MB) |
| Mycoplasma genitalium | ATCC 33530 | PSDB (348 KB) | UniProt XML File (3 MB) |
| Mycoplasma pneumoniae | ATCC 29342 | PSDB (436 KB) | UniProt XML File (4 MB) |
| Neisseria gonorrhoeae | ATCC 700825 | PSDB (1008 KB) | UniProt XML File (12 MB) |
| Neisseria meningitidis | MC58 | PSDB (1 MB) | UniProt XML File (14 MB) |
| Pseudomonas aeruginosa | ATCC 15692 PAO1 | PSDB (3 MB) | UniProt XML File (42 MB) |
| Salmonella typhimurium | LT2 ATCC 700720 | PSDB (2 MB) | UniProt XML File (33 MB) |
| Shewanella oneidensis | MR-1 | PSDB (2 MB) | UniProt XML File (28 MB) |
| Staphylococcus aureus | NCTC 8325 | PSDB (1 MB) | UniProt XML File (18 MB) |
| Streptococcus pneumoniae | ATCC BAA-255 | PSDB (1 MB) | UniProt XML File (14 MB) |
| Streptomyces coelicolor | ATCC BAA471 | PSDB (4 MB) | UniProt XML File (49 MB) |
| Thermotoga maritima | ATCC 43589 | PSDB (1 MB) | UniProt XML File (14 MB) |
| Vibrio cholerae | ATCC 39315 | PSDB (2 MB) | UniProt XML File (26 MB) |
| Vibrio fischeri | ATCC 700601 | PSDB (2 MB) | UniProt XML File (24 MB) |
| Yersinia pestis | ATCC 19428 | PSDB (2 MB) | UniProt XML File (29 MB) |
