ProSightPD 1.1: Integrating Top Down Searching in Proteome Discoverer 2.2

ProSightPD 1.1 is a plug-in for Thermo Fisher’s Proteome Discoverer 2.2 application that allows running ProSight searches of top down and middle down data within the Proteome Discoverer environment. It includes the workflows and nodes needed to conduct absolute mass and biomarker searches from within the PD interface, and to integrate these results other PD nodes. The Proteome Discoverer 2.2 third party nodes installer includes both ProSightPD 1.1 and ProSightPD 1.1 with High Mass. Using the third party node installer automatically activates free 60 day demos for both ProSightPD 1.1 and ProSightPD 1.1 with High Mass. The third party nodes installer can be found on the Thermo Software Portal or by contacting your local Thermo Sales representative to request the third party node installer.

Thermo Software Portal

ProSightPD 1.1 requires a license key and licensed copies of ProSightPC 4.0 and Proteome Discoverer 2.2. Users who purchased an earlier version of ProSightPC can upgrade for free to ProSightPC 4.0. Please contact us for an extended ProSightPD 1.1 license key and to upgrade for free to ProSightPC 4.0. ProSightPD 1.1 with High Mass expands on the free search offerings in ProSightPD 1.1. It supports Medium-High and Low-High workflows for analysis of proteins between 30 and 60 kDa. Please contact your local Thermo Sales representative for details on purchasing ProSightPD 1.1 with High Mass.

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Download the Quick Start Users Guide.

Quick Start Guide

Description

Key Features of ProSightPD include:

Viewing spectral support with PD Spectral View.
Easy viewing of Protein Groups, Proteins, and PSM (proteoforms).
Graphical top down workflow construction and integration with other PD workflows.
Click out to view Protein Center information on identified proteins.
Export of Top Down results for use in other applications.
Support for two new fragmentation methods; EThcD and UVPD.
Multithreading for fast processing.
True 64 bit support.
ProSightPD supports the following experiments; FT/FT, Express Scan / FT, and Ion Trap / FT experiments.

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