Galaxy Search

DATA WAREHOUSE PROSIGHTPD 4

Unlike other search engines, ProSightPD utilizes prior knowledge of the location of post translational and sequence modifications. This prior knowledge is stored in our proprietary PTM Warehouse™ file format. Users of all versions of ProSightPD 4 can use these files to install our compilation of the known modification information of specific organisms.

If you have any questions or requests, please contact the developers.

If you would like a database to be created for a particular organism, please send the taxonomy id here. Taxon identifiers can be found here. For instance, if you search for “Homo sapiens” on that UniProt site, the Taxon identifier is 9606.

Name Files Available for Download
Pierce Intact Protein Standard Mix TD Complex PSDB (44 KB) UniProt XML File (6 KB)
Top Down Standard Mix TD Complex PSDB (33 KB) UniProt TXT File (88 KB)

Organism/Species Strain Files Available for Download
Human Histones: July 2016 TD PSDB (128 KB) UniProt XML File (2 MB)

Organism/Species Strain Files Available for Download
Methanocaldo jannaschii ATCC 43067 PSDB (916 KB) UniProt XML File (13 MB)
Methanosarcina acetivorans ATCC 35395 C2A PSDB (2 MB) UniProt XML File (27 MB)
Nitrosopumilus maritimus SCM1 PSDB (860 KB) UniProt XML File (11 MB)
Sulfolobus solfataricus ATCC 35092 P2 PSDB (1 MB) UniProt XML File (18 MB)

Organism/Species Strain Files Available for Download
Aedes aegypti PSDB (18 MB) UniProt XML File (118 MB)
Ailuropoda melanoleuca PSDB (17 MB) UniProt XML File (227 MB)
Anopheles gambiae PSDB (10 MB) UniProt XML File (151 MB)
Apis mellifera PSDB (9 MB) UniProt XML File (91 MB)
Arabidopsis thaliana PSDB (29 MB) UniProt XML File (531 MB)
Aspergillus flavus ATCC 200026 PSDB (8 MB) UniProt XML File (75 MB)
Aspergillus niger ATCC 1015 PSDB (7 MB) UniProt XML File (74 MB)
Aspergillus orzyae ATCC 42149 PSDB (7 MB) UniProt XML File (82 MB)
Bos taurus PSDB (38 MB) UniProt XML File (334 MB)
Caenorhabditis briggsae PSDB (13 MB) UniProt XML File (137 MB)
Caenorhabditis elegans PSDB (20 MB) UniProt XML File (195 MB)
Candida albicans SC5314 PSDB (4 MB) UniProt XML File (54 MB)
Canis familiaris PSDB (45 MB) UniProt XML File (648 MB)
Danio rerio PSDB (37 MB) UniProt XML File (584 MB)
Dictyostelium discoideum PSDB (10 MB) UniProt XML File (114 MB)
Drosophila melanogaster PSDB (24 MB) UniProt XML File (497 MB)
Emericella nidulans ATCC 38163 PSDB (7 MB) UniProt XML File (108 MB)
Entamoeba histolytica PSDB (4 MB) UniProt XML File (51 MB)
Equus caballus PSDB (45 MB) UniProt XML File (414 MB)
Gallus gallus PSDB (28 MB) UniProt XML File (357 MB)
Gorilla gorilla gorilla PSDB (37 MB) UniProt XML File (433 MB)
Homo sapiens PSDB (53 MB) UniProt XML File (702 MB)
Hypocrea jecorina QM6a PSDB (6 MB) UniProt XML File (62 MB)
Loxodonta africana PSDB (22 MB) UniProt XML File (191 MB)
Macaca fascicularis PSDB (39 MB) UniProt XML File (329 MB)
Macaca mulatta PSDB (43 MB) UniProt XML File (552 MB)
Mus musculus PSDB (32 MB) UniProt XML File (378 MB)
Neurospora crassa ATCC 24698 PSDB (7 MB) UniProt XML File (82 MB)
Oryctolagus cuniculus PSDB (37 MB) UniProt XML File (405 MB)
Oryza sativa PSDB (23 MB) UniProt XML File (360 MB)
Pan troglodytes PSDB (41 MB) UniProt XML File (364 MB)
Plasmodium falciparum PSDB (5 MB) UniProt XML File (47 MB)
Rattus norvegicus PSDB (35 MB) UniProt XML File (495 MB)
Saccharomyces cerevisiae ATCC204508 S288 PSDB (5 MB) UniProt XML File (117 MB)
Schizosaccharomyces pombe ATCC 24843 PSDB (4 MB) UniProt XML File (67 MB)
Solanum lycopersicum PSDB (18 MB) UniProt XML File (177 MB)
Solanum tuberosum PSDB (24 MB) UniProt XML File (262 MB)
Strongylo purpuratus PSDB (21 MB) UniProt XML File (173 MB)
Sus scrofa PSDB (46 MB) UniProt XML File (387 MB)
Taeniopygia guttata PSDB (29 MB) UniProt XML File (278 MB)
Takifugu rubripes PSDB (43 MB) UniProt XML File (362 MB)
Tetrahymena thermophila SB210 PSDB (22 MB) UniProt XML File (164 MB)
Toxoplasma gondii PSDB (8 MB) UniProt XML File (57 MB)
Trypanosoma brucei brucei 927/4 GUTat10.1 PSDB (6 MB) UniProt XML File (80 MB)
Trypanosoma cruzi PSDB (9 MB) UniProt XML File (60 MB)
Vitis vinifera PSDB (16 MB) UniProt XML File (216 MB)
Xenopus tropicalis PSDB (44 MB) UniProt XML File (289 MB)

Organism/Species Strain Files Available for Download
Agrobacterium tumefaciens C58 ATCC 33970 PSDB (2 MB) UniProt XML File (43 MB)
Bacillus anthracis ATCC 14578 PSDB (2 MB) UniProt XML File (30 MB)
Bacillus cereus ATCC 10987 PSDB (2 MB) UniProt XML File (29 MB)
Bacillus subtilis 168 PSDB (2 MB) UniProt XML File (52 MB)
Bordetella pertussis ATCC 9797 PSDB (1 MB) UniProt XML File (18 MB)
Borrelia burgdorferi ATCC 35210 PSDB (640 KB) UniProt XML File (8 MB)
Caulobacter crescentus ATCC 19089 PSDB (1 MB) UniProt XML File (24 MB)
Clostridium acetobutylicum ATCC 824 PSDB (1 MB) UniProt XML File (23 MB)
Deinococcus radiodurans ATCC 13939 PSDB (1 MB) UniProt XML File (20 MB)
Enterococcus faecalis ATCC 700802 PSDB (1 MB) UniProt XML File (20 MB)
Escherichia coli ATCC 33849 K12 PSDB (2 MB) UniProt XML File (68 MB)
Francisella tularensis SCHU S4 PSDB (812 KB) UniProt XML File (9 MB)
Haemophilus influenzae ATCC 51907 PSDB (1000 KB) UniProt XML File (14 MB)
Helicobacter pylori ATCC 700392 PSDB (880 KB) UniProt XML File (11 MB)
Klebsiella pneumoniae ATCC 700721 PSDB (2 MB) UniProt XML File (34 MB)
Lactococcus lactis IL1403 PSDB (1 MB) UniProt XML File (13 MB)
Listeria monocytogenes ATCC BAA-679 PSDB (1 MB) UniProt XML File (21 MB)
Mycobacterium smegmatis ATCC 700084 PSDB (3 MB) UniProt XML File (36 MB)
Mycobacterium tuberculosis ATCC 9360 PSDB (2 MB) UniProt XML File (38 MB)
Mycoplasma genitalium ATCC 33530 PSDB (348 KB) UniProt XML File (3 MB)
Mycoplasma pneumoniae ATCC 29342 PSDB (436 KB) UniProt XML File (4 MB)
Neisseria gonorrhoeae ATCC 700825 PSDB (1008 KB) UniProt XML File (12 MB)
Neisseria meningitidis MC58 PSDB (1 MB) UniProt XML File (14 MB)
Pseudomonas aeruginosa ATCC 15692 PAO1 PSDB (3 MB) UniProt XML File (42 MB)
Salmonella typhimurium LT2 ATCC 700720 PSDB (2 MB) UniProt XML File (33 MB)
Shewanella oneidensis MR-1 PSDB (2 MB) UniProt XML File (28 MB)
Staphylococcus aureus NCTC 8325 PSDB (1 MB) UniProt XML File (18 MB)
Streptococcus pneumoniae ATCC BAA-255 PSDB (1 MB) UniProt XML File (14 MB)
Streptomyces coelicolor ATCC BAA471 PSDB (4 MB) UniProt XML File (49 MB)
Thermotoga maritima ATCC 43589 PSDB (1 MB) UniProt XML File (14 MB)
Vibrio cholerae ATCC 39315 PSDB (2 MB) UniProt XML File (26 MB)
Vibrio fischeri ATCC 700601 PSDB (2 MB) UniProt XML File (24 MB)
Yersinia pestis ATCC 19428 PSDB (2 MB) UniProt XML File (29 MB)

Databases for ProSightPC 4 can be found here.